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eFindSite

 
     
gateway standalone libraries
 

A ligand-binding site prediction and virtual screening algorithm detecting common ligand-binding sites in a set of evolutionarily related proteins identified with threading/fold recognition. eFindSite also performs ligand-based virtual screening against identified pockets.

  
eFindSite
If you use eFindSite, please cite the following papers:
1 Brylinski M, Feinstein WP. (2013) eFindSite: Improved prediction of ligand binding sites in protein models using meta-threading, machine learning and auxiliary ligands. J Comput Aided Mol Des 27 (6): 551-67.     
2 Feinstein WP, Brylinski M. (2014) eFindSite: Enhanced fingerprint-based virtual screening against predicted ligand binding sites in protein models. Mol Inf 33 (2): 135-50.